vmd.atomsel.rmsf

atomsel.rmsf()

Measures the root-mean-square fluctuation (RMSF) along a trajectory on a per-atom basis. RMSF is the mean deviation from the average position

Parameters:

• first (int) – First frame to include. Defaults to 0 (beginning).
• last (int) – Last frame to include. Defaults to -1 (end).
• step (int) – Use every step-th frame. Defaults to 1 (all frames)

Returns:

(list of float) – RMSF for each atom in selection